Projects
Polymer ligation in PBC
C++
MPI
Implementation of a method to avoid finite size issues in the cyclisation of a polymer through the periodic boundaries
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Loop Extrusion and Briding in LAMMPS
C++
MPI
Implementation of a LAMMPS Fix to model Loop Extrusion and Bridging driven by SMC Molecules
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MLKnots
Python
Numpy
Tensorflow
Feature engineering and prediction of Knotted IDs in MD Simulations
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Physics of Data Projects
Python
Numpy
Pytorch
VHDL
R
Applied AI, Bayesian techniques and Hardware design project for the M.Sc. in Physics of Data
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